data_processing package

Subpackages

• data_processing.image_analysis package
  • Submodules
  • data_processing.image_analysis.analysis_registry module
    • register_class()
    • get_image_analysis_type()
    • get_available_analysis()
  • data_processing.image_analysis.base_image_analyzer module
    • ImageAnalysisTemplate
      • ImageAnalysisTemplate.get_measurement_points()
  • data_processing.image_analysis.cellpose module
    • Cellpose_algorithm
      • Cellpose_algorithm.filter_cellpose_masks()
      • Cellpose_algorithm.image_segmentation()
      • Cellpose_algorithm.get_measurement_points()
  • data_processing.image_analysis.circles module
    • Circles
      • Circles.get_contour_centers_and_radii()
      • Circles.filter_by_size()
      • Circles.get_measurement_points()
  • data_processing.image_analysis.hexagonal_mesh module
    • HexagonalMesh
      • HexagonalMesh.get_mesh_nodes()
      • HexagonalMesh.get_delaunay_edges()
      • HexagonalMesh.filter_edges_by_distance()
      • HexagonalMesh.find_midpoints_and_centroids()
      • HexagonalMesh.get_measurement_points()
  • data_processing.image_analysis.pixel_stage_converter module
    • z_no_transform()
    • z_normal()
    • PixelStageConverter
      • PixelStageConverter.convert_xy()
      • PixelStageConverter.convert_z_auto()
      • PixelStageConverter.convert_z()
      • PixelStageConverter.convert_points()
  • data_processing.image_analysis.z_scan_max_intensity module
    • Max_intensity_Z_Scan
      • Max_intensity_Z_Scan.get_max_intensity()
      • Max_intensity_Z_Scan.get_measurement_points()
  • Module contents
• data_processing.processor package
  • Submodules
  • data_processing.processor.zeiss_FCS_processor module
    • ZeissFCSProcessor
      • ZeissFCSProcessor.mean_intensity_from_photon_data()
      • ZeissFCSProcessor.find_highest_intensity_file()
      • ZeissFCSProcessor.get_measurement_points()
      • ZeissFCSProcessor.save_measurement_points()
  • data_processing.processor.zeiss_image_processor module
    • ZeissImageProcessor
      • ZeissImageProcessor.get_analysis_type()
      • ZeissImageProcessor.get_measurement_points()
      • ZeissImageProcessor.save_measurement_points()
  • Module contents

Submodules

data_processing.main_processor module

Module contents